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位置权重矩阵、吉布斯采样器和相关的测试主题意义表征和预测
表7
输出的pwm的定量测量的强度确定主题。输出DAMBE [
53,
54]。
|
| SeqName |
主题 |
开始 |
优势比 |
|
| Seq1 |
TTATCA |
18 |
163.6602 |
| Seq2 |
CGGTCA |
22 |
14.5511 |
| Seq3 |
CTATCA |
14 |
101.8203 |
| Seq4 |
AGATAA |
17 |
9.1127 |
| Seq5 |
TGATTA |
16 |
12.9266 |
| Seq6 |
CTATCT |
18 |
90.7790 |
| Seq7 |
TTATCA |
20. |
163.6602 |
| Seq8 |
TTATCA |
2 |
163.6602 |
| Seq9 |
CTATAA |
17 |
58.1420 |
| Seq10 |
CTATCT |
14 |
90.7790 |
| Seq11 |
TGGTCA |
21 |
23.3886 |
| Seq12 |
TTGTAA |
33 |
38.9024 |
| Seq13 |
TTATCT |
20. |
145.9129 |
| Seq14 |
TTATCT |
2 |
145.9129 |
| Seq15 |
TTATCA |
10 |
163.6602 |
| Seq16 |
CTATAA |
3 |
58.1420 |
| Seq17 |
TTATCC |
13 |
34.3258 |
| Seq18 |
AGATAT |
20. |
8.1245 |
| Seq19 |
TGATAA |
16 |
32.0835 |
| Seq20 |
AGATAA |
24 |
9.1127 |
| Seq21 |
CTGTAT |
12 |
21.5783 |
| Seq22 |
CTGTAT |
0 |
21.5783 |
| Seq23 |
CTATCT |
23 |
90.7790 |
| Seq24 |
TTGTCT |
4 |
60.7395 |
| Seq25 |
TTATCT |
17 |
145.9129 |
| Seq26 |
CTATCG |
15 |
21.2368 |
| Seq27 |
TTATCA |
19 |
163.6602 |
| Seq28 |
CTATCT |
15 |
90.7790 |
| Seq29 |
TTGTCA |
2 |
68.1272 |
|
| 的意思是 |
|
|
76.3120 |
| 方差 |
|
|
57.8163 |
|
|
